PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0169s0070.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 183aa    MW: 20959.5 Da    PI: 10.4876
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0169s0070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1023.4e-32103161159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg Hnh+
  SapurV1A.0169s0070.1.p 103 LDDGYRWRKYGQKAVKKNKFPRSYYRCTYQGCNVKKQVQRLTKDEGVVVTTYEGMHNHH 161
                             59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-3288161IPR003657WRKY domain
SuperFamilySSF1182901.96E-2895162IPR003657WRKY domain
PROSITE profilePS5081129.42598163IPR003657WRKY domain
SMARTSM007743.6E-37103162IPR003657WRKY domain
PfamPF031067.5E-26104161IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MEKIQISFPL ASTNHPASSM TNNSHALSDF KADSISSGFL ESRRENHRLE PRTSSEINGV  60
RSSQSASFGT GSQTERKAAK KKGEKKIRKP RYAFQTRSQV DKLDDGYRWR KYGQKAVKKN  120
KFPRSYYRCT YQGCNVKKQV QRLTKDEGVV VTTYEGMHNH HVEKSSDNFE HILSQMQIYT  180
PF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A2e-2893162776Probable WRKY transcription factor 4
1wj2_A2e-2893162776Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006373216.11e-95hypothetical protein POPTR_0017s09750g
SwissprotQ9FYA25e-55WRK75_ARATH; Probable WRKY transcription factor 75
TrEMBLU5FIL51e-95U5FIL5_POPTR; Uncharacterized protein
STRINGPOPTR_0017s09750.13e-95(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF115634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-56WRKY DNA-binding protein 75